Hey vince
it could be this
http://kb.mozillazine.org/index.phtml?title=Thunderbird_:_Issues_:_empty_folders
or it could be this
http://kb.mozillazine.org/index.phtml?title=Thunderbird_:_Issues_:_Disappearing_mail
both of which I had to deal with when I migrated from win32
earlier this week.
-john
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